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Survival-associated eQTLs across different cancer types


We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "STAD"
e.g., "rs1824937"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
LGG rs7033379 chr9:126949079 C/T 1.18E-6 407 12.92 12.55 15.57 KM Plot
LGG rs7034440 chr9:5322157 A/G 0.000214 407 13.2 17.53 15.17 KM Plot
LGG rs7034776 chr9:25718023 C/T 3.62E-6 407 15.57 13.02 19.18 KM Plot
LGG rs7037763 chr9:126950112 C/T 1.25E-6 407 15.37 11.1 12.92 KM Plot
LGG rs7038991 chr9:123681275 C/T 0.000143 407 15.18 15.55 6.63 KM Plot
LGG rs7040390 chr9:33873195 A/G 5.67E-6 395 15.55 16.62 6.13 KM Plot
LGG rs7044681 chr9:126947658 T/C 1.69E-6 406 15.37 10.73 12.92 KM Plot
LGG rs7045157 chr9:126947998 T/G 1.69E-6 406 15.37 10.73 12.92 KM Plot
LGG rs7045708 chr9:94621395 A/C 6.99E-5 407 17.55 16.47 15.18 KM Plot
LGG rs7045796 chr9:93919427 G/C 4.18E-5 399 14.37 18.97 19.2 KM Plot
LGG rs7046632 chr9:93919341 C/T 4.18E-5 399 14.1 19 19.2 KM Plot
LGG rs7067667 chr10:70299975 A/G 2.92E-13 407 0 11.92 15.7 KM Plot
LGG rs7067865 chr10:908387 C/T 2.66E-6 405 15.13 17.73 10.57 KM Plot
LGG rs7068300 chr10:33438010 A/G 0 406 15.03 18.43 5.93 KM Plot
LGG rs7071977 chr10:122639363 G/T 3.8E-5 397 16.28 14.9 16.3 KM Plot